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	<title>Joe D &#187; philosophy of science</title>
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	<description>The syndicated and amalgamated writings of Joe D</description>
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		<title>Scientists bend observation to fit evolution</title>
		<link>http://joe.dunckley.me.uk/2011/06/scientists-bend-observation-to-fit-evolution/</link>
		<comments>http://joe.dunckley.me.uk/2011/06/scientists-bend-observation-to-fit-evolution/#comments</comments>
		<pubDate>Mon, 20 Jun 2011 16:31:25 +0000</pubDate>
		<dc:creator>Joe</dc:creator>
				<category><![CDATA[lay science]]></category>
		<category><![CDATA[badscience]]></category>
		<category><![CDATA[biology]]></category>
		<category><![CDATA[creationism]]></category>
		<category><![CDATA[creationist claims]]></category>
		<category><![CDATA[evolution]]></category>
		<category><![CDATA[philosophy of science]]></category>
		<category><![CDATA[science]]></category>
		<category><![CDATA[scientific method]]></category>

		<guid isPermaLink="false">http://joe.dunckley.me.uk/?p=464</guid>
		<description><![CDATA[This is another archival repost, originally posted on the old blog in feb 2009, during the Darwin 200 celebrations. I wrote the majority of this post a couple of years ago, when I had the intention to do a regular &#8230; <a href="http://joe.dunckley.me.uk/2011/06/scientists-bend-observation-to-fit-evolution/">Continue reading <span class="meta-nav">&#8594;</span></a>]]></description>
			<content:encoded><![CDATA[<p><em>This is another archival repost, originally posted on the old blog in feb 2009, during the Darwin 200 celebrations.</em></p>
<p><em>I wrote the majority of this post a couple of years ago, when I  had the intention to do a regular &#8220;creationist claim&#8221; feature, but for  some reason never got around to polishing and posting it at the time.</em></p>
<p>When children wish to wind each other up in an argument, they need  look no further than the chant &#8220;I know you are, you said you are, but  what am I?&#8221;  It&#8217;s a phrase to suit all occasions, and it sounds the  death knell for the ailing argument.  This week&#8217;s &#8220;creationist claim&#8221; is  an example of how creationists (and other pseudoscientists) adopt this  chant.  The following are from <a rel="nofollow" href="http://www.wellingtongrey.net/miscellanea/archive/2007-01-15%20--%20science%20vs%20faith.html" target="_blank">WellingtonGrey.net</a>:</p>
<p style="text-align: left;"><img class="aligncenter" title="Wellington Grey: Science vs Faith" src="http://farm3.static.flickr.com/2263/2182220033_85166ec83f.jpg" alt="" width="500" height="391" />Creationists do not follow the scientific method.  The Answers in  Genesis &#8220;Creation Museum&#8221; in Kentucky presents the visitor with a pair  of paleontologists: a &#8220;creationist&#8221; and an &#8220;evolutionist&#8221;, and tell you  that they accept the same data, but simply reach different conclusions  based upon it.  Paul Taylor of Answers in Genesis UK, in his talk at  Skeptics in the Pub a few months ago, told us that the difference  between creationism and evolutionism is only that the two set out with  different but equally valid assumptions &#8212; the evolutionist&#8217;s is just  that the universe is natural and material; the creationist&#8217;s is just  that the bible is the literal and infallible word of God.  Two <em>equally</em> valid assumptions, I&#8217;m sure you&#8217;ll agree.</p>
<p style="text-align: left;">But the idea that creationists are looking at the data &#8212; any data &#8212;  is simply not true.  Sometimes good data is discarded; sometimes data  is invented; sometimes a piece of data only fits their conclusions  because other facts are ignored.  Most of the time, however, data is  simply irrelevant: creationists are ignorant of the vast majority of the  relevant science and evidence, and that doesn&#8217;t hinder them in their  cause in the slightest.  Creationism, it an exercise in spin; the  science is irrelevant.</p>
<p style="text-align: left;">The theory of evolution was discovered in the mid-19th century, when  Christianity still permeated to every corner of society, politics and  science.  Though we had begun the task of filling in those gaps in our  knowledge in which God resided &#8212; with Copernicus, Newton, <em>et al</em> &#8212; God was still the unchallenged creator of everything, especially  life, and a literal Genesis was common, even among scientists.  Indeed,  Darwin was middle-aged before the term &#8220;science&#8221; became widespread; he  would have been more familiar with &#8220;natural philosophy&#8221; and &#8220;natural  history&#8221;: defined then as the study of God&#8217;s handiwork.  Men that we now  call scientists saw themselves as investigating God&#8217;s creation, and  many thought it was a simple case of filling in the details of a story  summarised in Genesis.  When scientists in the 19th century were  convinced of the old earth and of evolution, it was <em>despite</em> their prejudices, and not <em>because</em> of them.  Upon closing the <em>Origin</em>,  Huxley kicked himself for not thinking of such an obvious idea himself:  the power of and evidence for the theory was great even then, but the  intellectual climate had prevented others from discovering it.</p>
<p style="text-align: left;">When creationists accuse scientists of bending observations to fit  their theories, it suggests that they have an incomplete understanding  of the scientific method.  Creationists take the data produced by  scientists (for they have produced none of their own), and see if they  can use it to construct an argument that will convince non-scientists  that creationism is scientific.  They assume, therefore, that scientists  are doing something similar: taking the data they find, shoehorning it  into their own explanation of the world, and dressing it up to parade  for the public and seek their acceptance.</p>
<p style="text-align: left;">Needless to say, this is not how science works.  Observation is an  important part of science, but it is not unfocused observation.  It is  observation guided by questions specifically designed to test the truth  of theories.  Scientists do not say &#8220;lets go observe the world&#8221;, but ask  &#8220;if I observe this system, what would I expect to find, based on my  theory?&#8221;, and &#8220;what kinds of observations would I not expect to find if  my theory is true?&#8221;  Upon seeking those observations, we discover  something about the validity of the theory.  Note also that these  questions are not &#8220;what evidence should I gather to prove my theory  right?&#8221;, but, &#8220;what questions should I ask whose answers could  potentially prove my theory <em>wrong</em>?&#8221;</p>
<p style="text-align: left;">The creationist community is relatively homogeneous, consisting  primarily of the American evangelical Christianity branch, and the  Islamic branch (there are others, but they are not part of the same  phenomenon).  Their preconceptions are the same, based ultimately upon  the same story, invented by Middle-Eastern nomadic herdsmen several  thousand years ago; and their methods are the same, based upon faith,  authority and revelation.  The scientific community is not homogeneous:  it includes liberals and conservatives, people of all nations, races and  cultures, people with non-religious upbringings, and religious  upbringings including Christianity and Islam, but also Hinduism,  Buddhism, and many more besides; and its methods are based on  questioning, skepticism, and competition to make the big new  discoveries.  Scientists have their prejudices, but it&#8217;s hard to believe  that in such a large, diverse and inquisitive group, any particular  prejudice could have such a pervasive and long-lasting effect.</p>
<p style="text-align: left;">Creationist argument is sham science, put on as a PR exercise.  It is  reminiscent of the cargo cult science of alternative medicine.  It is  supposed to look like science to those who do not look too closely.   There are data used and numbers cited, and these put in the context of  an explanation of how and why the world works.  But when you look  closer, you find that the data are carefully chosen, and the numbers a  diversionary tactic.  And in place of the scientist&#8217;s toolkit &#8212;  empiricism, rationalism, skepticism, and logic &#8212; there is a creationist  toolkit: faith, revelation, and spin.  And they are so lacking in  imagination that whenever this is exposed, they can only chant &#8220;I know  you are.  You said you are.  But what am I?&#8221;</p>
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		<title>Simple rules</title>
		<link>http://joe.dunckley.me.uk/2011/02/simple-rules/</link>
		<comments>http://joe.dunckley.me.uk/2011/02/simple-rules/#comments</comments>
		<pubDate>Wed, 23 Feb 2011 20:06:46 +0000</pubDate>
		<dc:creator>Joe</dc:creator>
				<category><![CDATA[lay science]]></category>
		<category><![CDATA[abortion]]></category>
		<category><![CDATA[badscience]]></category>
		<category><![CDATA[creationism]]></category>
		<category><![CDATA[economics]]></category>
		<category><![CDATA[empiricism]]></category>
		<category><![CDATA[environmentalism]]></category>
		<category><![CDATA[epistemology]]></category>
		<category><![CDATA[organic food]]></category>
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		<guid isPermaLink="false">http://joe.dunckley.me.uk/?p=616</guid>
		<description><![CDATA[This is another archival repost, originally written for the old blog in november 2007. The main driving force for creationists is not science, but ethics. Their trump card is that &#8220;evolution is immoral&#8221;: they cite &#8220;might makes right&#8221; and eugenics, &#8230; <a href="http://joe.dunckley.me.uk/2011/02/simple-rules/">Continue reading <span class="meta-nav">&#8594;</span></a>]]></description>
			<content:encoded><![CDATA[<p><em>This is another archival repost, originally written for the old blog in november 2007.</em></p>
<p>The main driving force for creationists is not science, but ethics.   Their trump card is that &#8220;evolution is immoral&#8221;: they cite &#8220;might makes  right&#8221; and eugenics, quote Darwin&#8217;s <a href="http://cotch.net/blog/20071102_1717">supposedly racist terminology</a> in <em>The Origin</em> and <em>Voyage</em>,  and put evolution at the centre of Nazi doctrine. Everything from  school massacres to teenage pregnancy is blamed on &#8220;evolutionization&#8221;.<small><sup>[1]</sup></small> It is not evolution that specifically bothers them; rather, evolution  is a prominent representative of all things that aren&#8217;t biblically  literal.  In a world where the bible is not simple, straightforward and  inerrant, ethics require rational thought and empirical facts.  There  are fuzzy lines between right and wrong, and tough choices where the  lesser of two evils is difficult to determine.  Creationists don&#8217;t care  about the truth; rather, they are angry that evolution casts doubts on  their book of simple rules.</p>
<p>The anti-abortion movement appears convinced that a massive  international genocide is occurring.  Their argument is that taking a  life is murder, and life begins at conception.  They are not using  &#8220;life&#8221; in any scientific sense, nor expecting their argument to be taken  as a scientific one.  To try arguing the matter on scientific grounds  is to throw your time away.  Try a Socratic session of defining terms  and you will be accused of dehumanising through language, in the mould  of the Nazi holocaust.  Arguments over when consciousness or pain  detection begins to develop will persuade nobody, because they rely on  the anti-abortionist admitting that life does not have solid boundaries,  but has grey areas, in which difficult ethical decisions lie.  The  argument is not about when life begins, it is about simple rules.</p>
<p>G.K. Chesterton is oft quoted as saying something along the lines of  &#8220;the problem with not believing in God is not that one believes in <em>nothing</em>, but that one will believe in <em>anything</em>.&#8221;<small><sup>[2]</sup></small> I am not so pessimistic, but it does seem to be true that in the  absence of God&#8217;s simple rules, people do their best to fill the vacuum.   Take the organic food movement.  Organic food is quickly rising in  popularity in the United Kingdom because it markets itself as tastier  and healthier, but most of all because it is ethical: good for the  environment, and fair on the producers.  Buyers of organic are making  the simple rule &#8220;organic is ethical&#8221;, and delegating the difficult tasks  to the producers and guardians of the organic brand.  Technically, this  may be classed as the fallacy of &#8220;appeal to authority&#8221;, but in practice  it is reasonable, as none of us has time enough to investigate  everything in depth ourselves, and so we must delegate at least some of  the work to authorities.  However, when delegating the task, most people  assume that the producers and the guardians of the organic brand will  be taking an empirical approach to deciding the most ethical growing  practices, and the rules for producing the healthiest, tastiest and most  environmentally friendly food.  Sadly, they are not.  The organic  movement has written its own holy book of simple rules and superstition.   The empirically determined healthiest and tastiest product is  substituted with the most <em>natural</em> product.  All chemical  pesticides, herbicides, fertilisers and GM are out, while natural  equivalents are in: a surrogate in place of improving biodiversity.   Instead of developing sensible rules for the use of pharmaceuticals and  antibiotics, which farming has traditionally grossly misused, the  organic movement dispenses with them in favour of &#8212; don&#8217;t laugh, animal  welfare is at stake here &#8212; <a rel="nofollow" href="http://www.omsco.co.uk/index.cfm/organicmilk/WhyOrganic.AnimalWelfare" target="_blank">homeopathy</a>.</p>
<p>In last December&#8217;s <a rel="nofollow" href="http://www.economist.com/opinion/displaystory.cfm?story_id=8381375" target="_blank">leader criticising the organic and fair trade movements</a>, <em>The Economist</em> miss the point.  Instead of criticising those movements for judging  their efficacy by surrogate outcomes and arbitrary rules, they simply  list their own alternative surrogate outcomes and arbitrary rules.  Both  sides are merely providing just-so stories for why their farming  methods are better, rather than looking at actual empirical measurements  of the true results they want to achieve.  Of course, <em>The Economist</em> is not even interested in the same results as the organic and fair  trade movements: they are interested in the simple rule of a free  market, no ifs and no buts.</p>
<p>Simple minds need simple rules; but intelligent rational people can  easily find themselves seduced by them too, if they are not wary.   Science has simple rules too, but of a different kind.  Science has  elegant equations and beautiful theories that make your heart race when  their simplicity clicks.  Witness Thomas Henry Huxley&#8217;s comments on  closing <em>The Origin of Species</em>: &#8220;Why didn&#8217;t I think of that?&#8221;  The  most awesome aspect of evolution is that such simple rules produce the  complex wonders of life.  Life, when it becomes complex, no longer  conforms to any one simple rule.  Neither can our lives.  In  <a rel="nofollow" href="http://www.youtube.com/watch?v=b66SlBA948o" target="_blank">an episode of <em>Father Ted</em></a>,  the senile old drunk Father Jack professes the least understanding, but  provokes the most productive thought from others, with his mantra &#8220;that  would be an ecumenical matter&#8221;.  If you&#8217;re faced with difficult  questions or fierce arguments, and in need of a simple rule, I offer you  this: &#8220;that would be an empirical matter.&#8221;  And from there, let the  wonderful complexity blossom.</p>
<h4>References</h4>
<ol>
<li>Tom DeLay, quoted in &#8220;Evolution Revolution&#8221;, <a rel="nofollow" href="http://www.pbs.org/wgbh/evolution/religion/revolution/1990.html" target="_blank">PBS.org</a>.</li>
<li>Though the American Chesterton Society have trouble <a rel="nofollow" href="http://www.chesterton.org/qmeister2/any-everything.htm" target="_blank">verifying the source</a>.</li>
</ol>
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		<title>Lay Science: Suspending Disbelief</title>
		<link>http://joe.dunckley.me.uk/2010/09/lay-science-suspending-disbelief/</link>
		<comments>http://joe.dunckley.me.uk/2010/09/lay-science-suspending-disbelief/#comments</comments>
		<pubDate>Sun, 26 Sep 2010 23:01:31 +0000</pubDate>
		<dc:creator>Joe</dc:creator>
				<category><![CDATA[lay science]]></category>
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		<guid isPermaLink="false">http://joe.dunckley.me.uk/?p=412</guid>
		<description><![CDATA[I was listening to an old episode of the SETI institute&#8217;s podcast Are We Alone, in which they talked to a CSICOP (or whatever it is they call themselves these days) investigator. He described how he approached claims of the &#8230; <a href="http://joe.dunckley.me.uk/2010/09/lay-science-suspending-disbelief/">Continue reading <span class="meta-nav">&#8594;</span></a>]]></description>
			<content:encoded><![CDATA[<p>I was listening to an old episode of the SETI institute&#8217;s podcast <em>Are We Alone</em>,  in which they talked to a CSICOP (or whatever it is they call  themselves these days) investigator. He described how he approached  claims of the paranormal: he was <em>neutral</em>, and he “suspended  disbelief” while he investigated the claim. He is not the only person to  state that they “suspend disbelief” when looking at wacky claims. But  he is wrong. He described his methodology in greater detail, and with  case studies. What he is actually doing is following the stereotype  (&#8220;type workflow&#8221;?) of the scientific method: in science, we make new  hypotheses &#8212; wacky or tame &#8212; about how the world works, but it is  assumed that the <em>null</em> hypothesis is true until we have evidence to suggest otherwise.  We work on the assumption that our wacky new hypothesis is <em>not</em> true, until we can discover evidence that it <em>is</em>.</p>
<p><a href="http://www.layscience.net/node/1105"><em>Continue reading at Lay Science&#8230;</em></a></p>
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		<title>Lay Science: The Way The World Is</title>
		<link>http://joe.dunckley.me.uk/2010/06/lay-science-the-way-the-world-is/</link>
		<comments>http://joe.dunckley.me.uk/2010/06/lay-science-the-way-the-world-is/#comments</comments>
		<pubDate>Mon, 14 Jun 2010 21:02:35 +0000</pubDate>
		<dc:creator>Joe</dc:creator>
				<category><![CDATA[lay science]]></category>
		<category><![CDATA[books]]></category>
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		<guid isPermaLink="false">http://joe.dunckley.me.uk/?p=108</guid>
		<description><![CDATA[I&#8217;ve posted a quick review of The Way The World Is, physicist-vicar John Polkinghorne&#8217;s attempt at explaining to other scientists why he is a Christian.  It&#8217;s a tedious and embarrassing piece of work.  The book, that is.  The post, I &#8230; <a href="http://joe.dunckley.me.uk/2010/06/lay-science-the-way-the-world-is/">Continue reading <span class="meta-nav">&#8594;</span></a>]]></description>
			<content:encoded><![CDATA[<p>I&#8217;ve posted a quick review of <a href="http://layscience.net/node/1055"><em>The Way The World Is</em></a>, physicist-vicar John Polkinghorne&#8217;s attempt at explaining to other scientists why he is a Christian.  It&#8217;s a tedious and embarrassing piece of work.  The book, that is.  The post, I hope, is at least entertainingly sarcastic.  <a href="http://layscience.net/node/1055">Read it here</a>.</p>
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		<title>Lay Science: Further research is necessary</title>
		<link>http://joe.dunckley.me.uk/2010/03/lay-science-further-research-is-necessary/</link>
		<comments>http://joe.dunckley.me.uk/2010/03/lay-science-further-research-is-necessary/#comments</comments>
		<pubDate>Thu, 18 Mar 2010 23:25:05 +0000</pubDate>
		<dc:creator>Joe</dc:creator>
				<category><![CDATA[lay science]]></category>
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		<guid isPermaLink="false">http://joe.dunckley.me.uk/?p=51</guid>
		<description><![CDATA[The paper that initiated the great MMR hoax has been thoroughly discredited and retracted by the journal that published it, but the anti-vaxxers still claim &#8212; and hoodwink some parents &#8212; that more research is required to establish whether or &#8230; <a href="http://joe.dunckley.me.uk/2010/03/lay-science-further-research-is-necessary/">Continue reading <span class="meta-nav">&#8594;</span></a>]]></description>
			<content:encoded><![CDATA[<p>The paper that initiated the great MMR hoax has been <a href="http://layscience.net/search/node/Wakefield">thoroughly  discredited</a> and retracted by the journal that published it, but the  anti-vaxxers still claim &#8212; and hoodwink some parents &#8212; that more  research is required to establish whether or not vaccines cause autism.   I thought therefore that it was time to repost my comments on a rather  more surprising source that happily promoted the bogus claim that &#8220;more  research is necessary&#8221;.</p>
<p><a href="http://layscience.net/node/982"><em>Continue reading at Lay Science&#8230;</em></a></p>
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		<title>In which Johnny Ball demonstrates why we can be confident that AGW is happening</title>
		<link>http://joe.dunckley.me.uk/2009/12/in-which-johnny-ball-demonstrates-why-we-can-be-confident-that-agw-is-happening/</link>
		<comments>http://joe.dunckley.me.uk/2009/12/in-which-johnny-ball-demonstrates-why-we-can-be-confident-that-agw-is-happening/#comments</comments>
		<pubDate>Mon, 21 Dec 2009 16:01:54 +0000</pubDate>
		<dc:creator>Joe</dc:creator>
				<category><![CDATA[lay science]]></category>
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		<guid isPermaLink="false">http://joe.dunckley.me.uk/?p=813</guid>
		<description><![CDATA[This is an archive repost, originally posted on the old blog shortly after Johnny Ball had made his first appearance at Nine Lessons And Carols For Godless People. Skepticism &#8212; the movement and the everyday scientific method &#8212; is about &#8230; <a href="http://joe.dunckley.me.uk/2009/12/in-which-johnny-ball-demonstrates-why-we-can-be-confident-that-agw-is-happening/">Continue reading <span class="meta-nav">&#8594;</span></a>]]></description>
			<content:encoded><![CDATA[<p><em>This is an archive repost, originally posted on the old blog shortly after Johnny Ball had made his first appearance at Nine Lessons And Carols For Godless People.</em></p>
<p>Skepticism &#8212; the movement and the everyday scientific method &#8212; is  about vetting the new ideas that want to take up residence in our minds.   It&#8217;s a critical thinking toolkit that is there to prevent us getting  fooled.  It&#8217;s not cynicism or stubborn disbelief, just a cautious and  questioning approach to the claims of others.  It&#8217;s knowing the  fallibility of the human mind; it&#8217;s the opposite of gullibility.</p>
<p>The gold standard that a skeptic seeks in an argument is to be able  to see and evaluate and understand the original science and data and  statistical analyses that supposedly support the claims of that  argument&#8217;s proponents.  But one doesn&#8217;t always have the time or  expertise to go around making such rigorous examinations of complicated  arguments.  In those situations it&#8217;s common to tentatively accept the  conclusions of experts in the field who you believe to have made those  rigorous examinations themselves and who you trust to have got those  examinations right.  Accepting the consensus of the experts without  having rigorously examined their evidence yourself is an argument from  authority &#8212; a &#8220;trick&#8221;, if you like, but <a rel="nofollow" href="http://www.quackometer.net/blog/2009/12/james-randi-global-warming-and-nature.html" target="_blank">one that is not entirely unacceptable</a>.</p>
<p>But for an issue as important as climate change, where we&#8217;re talking  about big risks and being asked to make big sacrifices, one wants to  make a more rigorous examination of the arguments and evidence and to be  more confident about the science than one would for matters of less  consequence.  But proponents and opponents of anthropogenic global  warming (AGW) both claim to have the science and the data and the  statistics on their side &#8212; they both claim to have applied skepticism  and the scientific method &#8212; and the lay person perhaps doesn&#8217;t have the  dozens of hours required to learn the maths and chemistry and physics  behind the arguments.  All they&#8217;re left with is picking the side with  the most PhDs in climate-related sciences, right?</p>
<p>But the AGW proponents have one other important thing going for them:  even if the skeptical lay person can&#8217;t independently evaluate the  claims of the proponents, they can easily see the absurdity of the  claims of the opponents.</p>
<p>For example, on this week&#8217;s <em><a rel="nofollow" href="http://www.littleatoms.com/" target="_blank">Little Atoms</a></em>, Johnny Ball embarrassed himself with this series of arguments:</p>
<ol>
<li> According to Ball, there <em>is</em> a scientific controversy  because: &#8220;would you consider a qualified engineer to be a scientist?  I  think I would, and the majority of engineers don&#8217;t believe that we&#8217;re  changing the climate.<small><sup>[citation needed]</sup></small>&#8221;  Well, no, engineers are not scientists.  <em>Some</em> engineers &#8212; a small minority &#8212; happen to also be scientists, but  engineering is not a science, at least, not in the sense that matters.   Many engineers know much about how physics and chemistry work, and most  probably know more mathematics than the average scientist.  They can  apply some scientific facts about the way the world works.  But they are  not <em>doing</em> science.  Science is a body of facts and theories about the way the world works, but far more importantly, it is a <em>way of studying the world</em>.   Science is a process and a tool, a method of empiricism, critical  thinking and skepticism.  Engineering and science share facts about the  world, but they are very different processes and very different tools.   The two professions think in different ways, and are rarely taught  anything about each-other&#8217;s way of working.</li>
<li> Climate scientists are &#8220;cooking the books for grant money&#8221;.  Yeah.   It&#8217;s the scam of the century in which tens of thousands of individuals  have abandoned their scientific principles to cooperate in successfully  defrauding all the governments and funding agencies of the world.  Also,  did I mention that they are <a rel="nofollow" href="http://www.davidicke.com/index.php/" target="_blank">Reptilians</a>?  Dudes, have you still not realised how absurd you look making this claim?</li>
<li> Ball points out that climate scientists ignore the sun-spots &#8212; we  keep shouting &#8220;sun-spots&#8221; and they keep ignoring us!  Uh.  Except, he  forgets that somebody went and invented Google.  We can all now google  about sun-spots and climate change, see just how climate scientists have  ignored them by, er, studying them and incorporating them into their  theories and models and papers and reports, and we can read the lay  summaries of climatologists and astronomers explaining why sun-spots  aren&#8217;t &#8212; and can&#8217;t be &#8212; more than a minor detail in climate.</li>
<li> Finally, Ball compares climate change &#8220;sceptics&#8221; to Darwin and  Faraday and Copernicus, while climate scientists are like eugenicists:  when Darwin proposed evolution, the scientific consensus was against  him, and it took a few decades for the rest of the scientific community  to catch up.  Ball seems to be proposing that, er, climate change  scepticism is, uhm, a new science that the rest of the scientific  community will catch up with over time.  Did he somehow miss the last  thirty years of climate scientists slowly convincing the scientific  community into consensus?</li>
</ol>
<p>The lay person can have some confidence that the climate  scientists are right about AGW not merely by weighing PhDs and picking  the authoritative argument.  They just need to look at the sheer amount  of money and effort poured into the argument by the denialists, and  snigger at how embarrassingly piss-poor are the claims that effort buys.   <a rel="nofollow" href="http://www.badscience.net/2009/12/copenhagen-climate-change-blah-blah/" target="_blank">Zombie arguments</a> and absurd conspiracies.  The climate scientists might be giving us  data and graphs and theories that we couldn&#8217;t possibly independently  verify, but when the best the denialists <a rel="nofollow" href="http://www.guardian.co.uk/environment/cif-green/2009/jul/01/bob-ward-exxon-mobil-climate" target="_blank">can buy</a> is a &#8220;rah rah rah look at the sun-spots&#8221; and a &#8220;help help, we&#8217;re being  oppressed, like Copernicus&#8221;, I know which argument my skeptical mind is  more persuaded by.</p>
<p>And this is also why Greenpeace need to shut up and let the grown-ups put the case for AGW.</p>
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		<title>Origin Ch.14: Explanatory power</title>
		<link>http://joe.dunckley.me.uk/2009/02/origin-ch-14-explanatory-power/</link>
		<comments>http://joe.dunckley.me.uk/2009/02/origin-ch-14-explanatory-power/#comments</comments>
		<pubDate>Thu, 26 Feb 2009 20:20:44 +0000</pubDate>
		<dc:creator>Joe</dc:creator>
				<category><![CDATA[darwin 200]]></category>
		<category><![CDATA[biology]]></category>
		<category><![CDATA[charles darwin]]></category>
		<category><![CDATA[darwin200]]></category>
		<category><![CDATA[evolution]]></category>
		<category><![CDATA[genomics]]></category>
		<category><![CDATA[origin of species]]></category>
		<category><![CDATA[philosophy of science]]></category>
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		<guid isPermaLink="false">http://joe.dunckley.me.uk/?p=369</guid>
		<description><![CDATA[This post is part of a series on The Origin Of Species.  It was originally posted on the old blog in feb 2009, during the Darwin 200 celebrations. It&#8217;s getting late in the book, and for a while now Darwin &#8230; <a href="http://joe.dunckley.me.uk/2009/02/origin-ch-14-explanatory-power/">Continue reading <span class="meta-nav">&#8594;</span></a>]]></description>
			<content:encoded><![CDATA[<p><em>This post is part of a <a href="../category/darwin-200/">series</a> on The Origin Of Species.  It was originally posted on the old blog in feb 2009, during the Darwin 200 celebrations.</em></p>
<p>It&#8217;s getting late in the book, and for a while now Darwin has not so  much been explaining and testing his theories, as sitting back and  letting his theories do some explaining and testing of their own.  It  seems to require constant repeating that a scientific &#8220;theory&#8221; is not a  &#8220;guess&#8221;.  A &#8220;theory&#8221; is a general principle which is supported by a  significant and diverse body of data and observations, which stands up  to testing, which makes predictions which can be shown to be true, and  which has explanatory power.  The explanatory power of evolution  permeates all branches of biology.</p>
<p>The classic line is that evolution turned biology from a &#8220;stamp  collecting&#8221; science into a modern and productive field.  Nevertheless,  taxonomists have not been dissuaded from their stamp collecting.  In  chapter 14, though, Darwin did give meaning to many of their practices  and trends.  Linnaeus, father of the taxonomic system, was found that  there were intuitive ways to place species in groups, and that the  relationship between those species was somehow something more than just  their shared traits.  Darwin showed that this was because taxonomy had  intuitively developed into grouping species roughly by how closely they  are related by descent, and that evolution, by explaining the patterns  of descent, thereby explained many of the quirks of taxonomy.   &#8220;Community of descent is the hidden bond that naturalists have been  unconsciously seeking.&#8221;</p>
<p>Evolution explains why we see great variation on the same fundamental  body plans, and how those slight morphological variations underpin  classification. And so evolution explains why, to the naturalist, it  feels right to classify a marsupial mouse amongst its fellow marsupials,  even though it superficially resembles the placental mouse.  And  evolution explains large scale trends, such as why some groups contain  so many more species or sub-groups than others.</p>
<p>And evolution explains why, even though there are real distinct  groups of species and real distinct groups of those groups, the system  of calling those groups orders, sub-orders, families, sub-families, and  genera is all so arbitrary &#8212; the observable divergence of  characteristics and the diversification of groups is highly variable  depending on the nature of those groups and their situation, and the  non-uniform nature of extinction further complicates things.  He uses an  analogy to the evolution of language, and it is often claimed (though I  am not sure whether it is true or a myth) that English has changed and  diversified much more rapidly and extensively than French.  (And  molecular biologists and genomicists will be pleased that this analogy  can also incorporate <a rel="nofollow" href="http://cotch.net/special:search.php?key=horizontal_transfer" target="_blank">horizontal transfer</a>.)</p>
<p>And evolution explains mimicry: why two butterflies which, based on  the finer details of their anatomy and life cycle, should be placed in  very distant groups, even though they look so similar that one can not  tell them apart while they swarm.  These mimics occur when one species  has evolved a defense against predation &#8212; foul taste, poison, or a  sting &#8212; and another takes advantage of the predator&#8217;s fear of that  species, or rather, any individual which looks like it belongs to that  species.  And evolution explains why the mimic is always the less  dominant species in terms of population than the mimicked.  And  evolution explains why mimicry is so much more common in insects than in  other major animal groups.</p>
<p>And evolution explains why such diverse species as the vertebrates  share such similar patterns of early development, and why vertebrate  body plans are not entirely different from those of other animals.   Today we can take this last principle even further: the field of  genomics combines evolution with molecular biology to further explain  quirks of classification, such as why bacteria are so hard to classify,  why traits can stick together, and how we can be sure that all of the  groups of life on earth can, ultimately, be classified into one group,  related by descent.</p>
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		<title>Origin Ch.13: Darwin the experimentalist</title>
		<link>http://joe.dunckley.me.uk/2009/02/origin-ch-13-darwin-the-experimentalist/</link>
		<comments>http://joe.dunckley.me.uk/2009/02/origin-ch-13-darwin-the-experimentalist/#comments</comments>
		<pubDate>Tue, 24 Feb 2009 20:42:38 +0000</pubDate>
		<dc:creator>Joe</dc:creator>
				<category><![CDATA[darwin 200]]></category>
		<category><![CDATA[biology]]></category>
		<category><![CDATA[charles darwin]]></category>
		<category><![CDATA[darwin200]]></category>
		<category><![CDATA[empiricism]]></category>
		<category><![CDATA[evolution]]></category>
		<category><![CDATA[origin of species]]></category>
		<category><![CDATA[philosophy of science]]></category>
		<category><![CDATA[science]]></category>

		<guid isPermaLink="false">http://joe.dunckley.me.uk/?p=384</guid>
		<description><![CDATA[This post is part of a series on The Origin Of Species.  It was originally posted on the old blog in feb 2009, during the Darwin 200 celebrations. Two pages into chapter thirteen we get a fantastic image of Darwin &#8230; <a href="http://joe.dunckley.me.uk/2009/02/origin-ch-13-darwin-the-experimentalist/">Continue reading <span class="meta-nav">&#8594;</span></a>]]></description>
			<content:encoded><![CDATA[<p><em>This post is part of a <a href="../category/darwin-200/">series</a> on The Origin Of Species.  It was originally posted on the old blog in feb 2009, during the Darwin 200 celebrations.</em></p>
<p>Two pages into chapter thirteen we get a fantastic image of Darwin  pottering in his conservatory, dipping his duck in various fish tanks.   Later on the same page he&#8217;s keeping a mug of mud on his desk, pulling  out the weeds as they come up.  At other points in the book we find him  cutting out pictures and counting the plants in his lawn.  <em>The Origin</em> is not just Darwin writing down his thoughts after 25 years of thinking  about the Galapagos.  Darwin made sure his argument was solid, and in  science, you find the solid ideas by giving them all a good shake, and  seeing which ones fall down under the stress.  Darwin made hypotheses  about how the world might look if his theory is true, and then took a  look to see whether the world cooperates.</p>
<p>Darwin&#8217;s theory dictated that all individuals within a species are  related by descent; species within a genus similarly related, but more  distantly; and so on for all life.  Darwin observed that there are many  fresh-water aquatic species whose individuals occupy many different  ponds or streams.  He reasoned that if all individuals of a species are  related, there must be some mechanism by which individuals from those  fresh-water aquatic species have spread from one pond to another.  He  made a hypothesis: that eggs from these species might stick to the feet  of ducks, and thus spread.  And so he found himself dipping ducks feet  in tanks, and seeing how long the duck&#8217;s feet could remain dry while  maintaining their ability to seed a sterile tank with pond life.   Nowadays he would probably need institutional ethics review board  approval for the use of fowl in laboratory research.</p>
<p>Other great practical work from Darwin includes determining the  relative areas of igneous, metamorphic, and sedimentary rocks in the  United States by cutting up a geological map and weighing the parts; and  the time he spent several weeks observing slugs eating weeds (described  <a rel="nofollow" href="http://scienceblogs.com/authority/2009/02/darwin_experimentalist.php" target="_blank">here</a> by Mike Dunford).  And there is one more great experiment that I have  heard attributed to Darwin, but for which I can sadly find no credible  evidence, and not even at hint in <em>Voyage</em>.  The story, told by  m&#8217;colleague, who in turn has attributed it to a friendly archivist at  the Grant Museum of Zoology (UCL), features a young Darwin in the  Galapagos spending an afternoon tossing land and marine iguanas into the  sea to see how long each could survive in the water.  The naive iguanas  would inevitably swim straight back to their spot on the shore, never  learning to avoid the bastard with the mean overarm who kept throwing  them back in.  It would be a good experiment to show whether both  species could have immigrated to the islands, or only the marine  variety.</p>
<p>It&#8217;s probably not true.  But Darwin was still an ingenious experimentalist.</p>
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		<title>Three cheers for Radio 4!</title>
		<link>http://joe.dunckley.me.uk/2008/09/three-cheers-for-radio-4/</link>
		<comments>http://joe.dunckley.me.uk/2008/09/three-cheers-for-radio-4/#comments</comments>
		<pubDate>Thu, 11 Sep 2008 14:45:27 +0000</pubDate>
		<dc:creator>Joe</dc:creator>
				<category><![CDATA[shouting at my radio]]></category>
		<category><![CDATA[badscience]]></category>
		<category><![CDATA[brian cox]]></category>
		<category><![CDATA[carl sagan]]></category>
		<category><![CDATA[dara o'brien]]></category>
		<category><![CDATA[lhc]]></category>
		<category><![CDATA[philosophy of science]]></category>
		<category><![CDATA[physics]]></category>
		<category><![CDATA[radio 4]]></category>
		<category><![CDATA[science]]></category>

		<guid isPermaLink="false">http://joe.dunckley.me.uk/?p=292</guid>
		<description><![CDATA[This is another archival repost from the old blog, originally from september 2008. It&#8217;s a right good science fest on Radio 4 at the moment. If you missed it, you must listen to Physics Rocks (available until 17/9). It&#8217;s Brian &#8230; <a href="http://joe.dunckley.me.uk/2008/09/three-cheers-for-radio-4/">Continue reading <span class="meta-nav">&#8594;</span></a>]]></description>
			<content:encoded><![CDATA[<p><em>This is another archival repost from the old blog, originally from september 2008.</em></p>
<p>It&#8217;s a right <em>good science</em> fest on Radio 4 at the moment.  If you missed it, you <em>must</em> listen to <em><a rel="nofollow" href="http://www.bbc.co.uk/programmes/b00d9yz5" target="_blank">Physics Rocks</a></em> (available until 17/9).  It&#8217;s Brian Cox talking to comedians about  their enthusiasm for science.  It&#8217;s a great antidote to some of the <a rel="nofollow" href="http://badscience.net/forum/viewtopic.php?f=3&amp;t=6114" target="_blank">neurocidal drivel</a> written by proudly illiterate <em>twats</em> (Brian Cox&#8217;s word, not mine) in the <a rel="nofollow" href="http://www.dailymail.co.uk/" target="_blank">less reputable</a> members of our gutter press.</p>
<p>They managed to get several of our favourite themes in the programme,  and seemed to be channeling the spirit of Carl Sagan.  In a  conversation with Alan Alda, the question &#8220;what&#8217;s the point of the LHC?&#8221;  was addressed—if the beauty of the universe isn&#8217;t enough for you:</p>
<blockquote><p>We can drive a car without knowing how to take it apart and put it together again.  But <em>somebody</em> better know how to put a car together, otherwise we&#8217;ll all be back on  foot again.  Every time we have figured out something basic about  nature—discovering the electron, figuring out how radio waves work &#8212; we  got an advance that has improved life on the planet immeasurably.</p></blockquote>
<p>In a conversation with Eddie Izzard, the fascinating topic of  multiverses came up.  Cox suggested that there is a good chance that,  while it may not be multiverses, the results of the LHC&#8217;s experiments  will cast light on something revolutionary—of Copernican proportions.  I  can see the next chapter in the shrinking-pains of the God-of-the-gaps  on the horizon&#8230;</p>
<p>In a conversation with Dara O&#8217;Brien, the topic somehow turned to CAM:</p>
<blockquote><p>O&#8217;Brien: &#8230; cos unlike Deepak Chopra, I know what &#8220;quantum&#8221; means&#8230;  it does actually mean something.  It doesn&#8217;t mean like &#8230; &#8216;I&#8217;m not  sure where my life is going&#8217;.</p>
<p>Cox: Ancient wisdom!  It would help me build a better mobile phone!</p>
<p>O&#8217;Brien: Oooh. Ancient wisdom, my arse.  Stop it, it&#8217;s awful&#8230;  Ancient herbal medicines: we tested them!  The ones that worked became  just &#8220;medicine&#8221;.  The rest is just a nice bowl of soup and some  potpourri&#8230; CERN isn&#8217;t going to help that either.  It&#8217;s not like you&#8217;re  going to find some neat way that it [homeopathy] will &#8212; there&#8217;s no bow  that goes on top of 120 particles to make it all just, you know&#8230;</p></blockquote>
<p>There were two more quotes I just had to share:</p>
<ul>
<li> Cox: The LHC will be a candle in the dark, lighting the way to a new and more profound understanding of the universe.</li>
<li> O&#8217;Brien: Physics does not rock.  Physics does not have to rock.   Physics underpins the very nature  of the universe and our understanding  of where we are.  Just tiny bits of flotsam floating in a much bigger  picture</li>
</ul>
<p>But, really, listen to the whole thing.</p>
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		<title>One god short of an atheist</title>
		<link>http://joe.dunckley.me.uk/2007/11/one-god-short-of-an-atheist/</link>
		<comments>http://joe.dunckley.me.uk/2007/11/one-god-short-of-an-atheist/#comments</comments>
		<pubDate>Mon, 12 Nov 2007 21:54:11 +0000</pubDate>
		<dc:creator>Joe</dc:creator>
				<category><![CDATA[Uncategorized]]></category>
		<category><![CDATA[badscience]]></category>
		<category><![CDATA[cognitive dissonance]]></category>
		<category><![CDATA[John Maynard Smith]]></category>
		<category><![CDATA[philosophy of science]]></category>
		<category><![CDATA[pseudoscience]]></category>
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		<category><![CDATA[richard dawkins]]></category>
		<category><![CDATA[science]]></category>

		<guid isPermaLink="false">http://joe.dunckley.me.uk/?p=470</guid>
		<description><![CDATA[This is another archival repost originally written for the old blog in november 2007. &#8220;Yes I agree, but this is different. Don&#8217;t lump us in with those charlatans!&#8221; Criticise quack miracle cures, irrational superstition, loony pseudoscience, and religion, and you &#8230; <a href="http://joe.dunckley.me.uk/2007/11/one-god-short-of-an-atheist/">Continue reading <span class="meta-nav">&#8594;</span></a>]]></description>
			<content:encoded><![CDATA[<p><em>This is another archival repost originally written for the old blog in november 2007.</em></p>
<p>&#8220;Yes I agree, but <em>this</em> is different.  Don&#8217;t lump us in with <em>those</em> charlatans!&#8221;</p>
<p>Criticise quack miracle cures, irrational superstition, loony  pseudoscience, and religion, and you will get in return an example of  the comment above.  You can see this particularly with Richard Dawkins,  due to his high profile.  Following <em>The God Delusion</em> and <em>Root Of All Evil</em> he got it from many of the newspaper reviewers and from the &#8220;fleas&#8221;:  &#8220;yes, I agree with you on political Islam, American evangelical  Christianity, creationism, an interventionist God, Zeus, the virgin  birth, and other such <em>obvious</em> nonsense, but <em>my</em> religion is different&#8221;. And again following <em>Enemies of Reason</em>: &#8220;yes, <em>of course</em> all of that is nonsense, why do you even need to make a programme about it?  Nobody takes <em>that</em> nonsense seriously!  But [ Ayurvedic medicine / homeopathy / dowsing /  ghosts / UFOs / my pet nonsense ] is different, and really is [  supported by evidence / unsuitable for study by double-blind clinical  trials / something that scientists might dismiss, but that I know <em>just works</em> ], if only you would keep an open mind!&#8221;</p>
<p>I take this as a sign that for most people, the argument is  effective: they understand why the scientific approach to understanding  the world works, and others fail.  The problem is cognitive dissonance:  to reconcile this with the fact that <em>they</em> have believed in and  invested so much time in some nonsense, they conjure reasons to believe  that the argument does not apply to their particular brand of nonsense.   It&#8217;s not easy to blame people for doing this: after all, we see many  very intelligent people doing the same thing.  Newton had alchemy,  Wallace had spiritualism, Pauling had vitamins.  There is a fantastic  set of <a rel="nofollow" href="http://www.peoplesarchive.com/browse/movies/3698/" target="_blank">videos of John Maynard Smith</a> on the People&#8217;s Archive, in which he talks of how long it took him (and  many other scientists, such as JBS Haldane), to escape the grip of  soviet-style communism.  JMS said: &#8220;it&#8217;s a reluctance to admit that one  has been <em>that</em> wrong &#8212; which is a not very honourable attitude.&#8221;   Something similar to the Soviet treatment of genetics can be seen today  with the libertarian treatment of climate change.  As Bernard Berenson  said: &#8220;Consistency requires you to be as ignorant today as you were a  year ago.&#8221;  And this is why science works: science requires you not to  cling on to ideas whose time has passed, but to be the first to try and  disprove them.</p>
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